Cotton (Gossypium L.) global distribution and adaptation to different geographic region.
Main Article Content
A. Orken
National center for biotechnology, Korgalzhyn hwy. 13/5, Astana, 010000, Kazakhstan
orkena23@gmail.com
Sh. Manabayeva
National center for biotechnology, Korgalzhyn hwy. 13/5, Astana, 010000, Kazakhstan
L.N. Gumilyov Eurasian National University, Satpayev st. 2, Astana, 010000, Kazakhstan
manabayeva@biocenter.kz
S. Makhmadjanov
Agricultural Experimental Station of Cotton and Melon Growing, Atakent, 160525 Kazakhstan
max_s1969@mail.ru
M. Ramazanova
National center for biotechnology, Korgalzhyn hwy. 13/5, Astana, 010000, Kazakhstan
malikaramazan.7@gmail.com
B. Kali
National center for biotechnology, Korgalzhyn hwy. 13/5, Astana, 010000, Kazakhstan
kali@biocenter.kz
A. Rakhimzhanova
National center for biotechnology, Korgalzhyn hwy. 13/5, Astana, 010000, Kazakhstan
r.aizhann@mail.ru
D. Tussipkan
National center for biotechnology, Korgalzhyn hwy. 13/5, Astana, 010000, Kazakhstan
tdilnur@mail.ruAbstract
Cotton (Gossypium L.) is one of the most economically significant crops globally, with its cultivation spanning diverse geographic regions. The genus Gossypium comprises over 50 species, four of which are widely cultivated for their superior fiber quality. First, this review provides a summary of the phylogey of Gossypium, including genomic features of diploid and allotetraploid species. Second, we detail the origin of all Gossypium species and the human-mediated introduction of G. arboreum, G. herbaceum, G. barbadense, G. hirsutum, and G. harknessii species into new areas. This review highlights the need for continued research into the genetic diversity and adaptive mechanisms of cotton to enhance its sustainable production worldwide.
Article Details
Accepted 2025-03-31
Published 2025-03-31
References
Ruan Y. L., Llewellyn D. J., Furbank R. T. Suppression of sucrose synthase gene expression represses cotton fiber cell initiation, elongation, and seed development // The Plant Cell. – 2003. – Vol. 15(4) – P. 952-964. https://doi.org/%2010.1105/tpc.010108
Chen Y., Dong H. Mechanisms and regulation of senescence and maturity performance in cotton // Field Crops Research. – 2016. – Vol. 189. – P. 1-9. https://doi.org/10.1016/j.fcr.2016.02.003
Ahmad S., Iqbal M., Muhammad T., Mehmood A., Ahmad S., Hasanuzzaman M. Cotton productivity enhanced through transplanting and early sowing // Acta Scientiarum. Biological Sciences. – 2018. – Vol. 40. – P. 1-7. https://doi.org/10.4025/actascibiolsci.v40i1.34610
Wendel J. F., Grover C. E. Taxonomy and evolution of the cotton genus, Gossypium // Cotton. – 2015. – Vol. 57. – P. 25-44. https://doi.org/10.2134/agronmonogr57.2013.0020
Ma Z., Zhang Y., Wu L., Zhang G., Sun Z., Li Z., Jiang Y., Ke H., Chen B., Liu Z., Gu Q., Wang Z., Wang G., Yang J., Wu J., Yan Y., Meng C., Li L., Li X., Mo S., … Wang X. High-quality genome assembly and resequencing of modern cotton cultivars provide resources for crop improvement // Nature Genetics. – 2021. – Vol. 53(9). – P. 1385-1391. https://doi.org/10.5281/zenodo.4851529.
Wu K. M., Guo Y. Y. The evolution of cotton pest management practices in China // Annu. Rev. Entomol. – 2005. – Vol. 50(1). – P. 31-52. https://doi.org/10.1146/annurev.ento.50.071803.130.349
Amin A., Nasim W., Mubeen M., Ahmad A., Nadeem M., Urich P., Fahad Sh., Ahmad Sh., Wajid A., Tabassum F., Hammad H.M., Sultana S.R., Anwar S., Baloch Sh.Kh., Wahid A., Wilkerson C.J., Hoogenboom G. Simulated CSM-CROPGRO-cotton yield under projected future climate by SimCLIM for southern Punjab, Pakistan // Agricultural Systems. – 2018. – Vol. 167. – P. 213-222. https://doi.org/10.1016/j.agsy.2017.05.010
Kushanov F. N. et al. Genetic analysis of mutagenesis that induces the photoperiod insensitivity of wild cotton Gossypium hirsutum subsp. purpurascens // Plants. – 2022. – Vol. 11(22) – P. 3012. https://doi.org/10.3390/plants11223012
Grover C. E. et al. Re-evaluating the phylogeny of allopolyploid Gossypium L // Molecular Phylogenetics and Evolution. – 2015. – Vol. 92. – P. 45-52. https://doi.org/10.1016/j.ympev.2015.05.023
Wang K., Wendel J. F., Hua J. Designations for individual genomes and chromosomes in Gossypium // Journal of Cotton Research. – 2018. – Vol. 1(1) – P. 1-5. https://doi.org/10.1186/s42397-018-0002-1
Chen X. et al. Targeted mutagenesis in cotton (Gossypium hirsutum L.) using the CRISPR/Cas9 system //Scientific reports. – 2017. – Vol. 7(1). – P. 44304. https://doi.org/10.1038/srep44304
Hawkins J. S. et al. Differential lineage-specific amplification of transposable elements is responsible for genome size variation in Gossypium //Genome research. – 2006. – Vol. 16(10). – P. 1252-1261. http://www.genome.org/cgi/doi/10.1101/gr.5282906.
Grover C. E. et al. Genetic analysis of the transition from wild to domesticated cotton (Gossypium hirsutum L.) //G3: Genes, Genomes, Genetics. – 2020. – Vol. 10(2). – P. 731-754. https://doi.org/10.1534/g3.119.400909
Wang M. et al. Genomic innovation and regulatory rewiring during evolution of the cotton genus Gossypium //Nature Genetics. – 2022. – Vol. 54(12). – P. 1959-1971. https://doi.org/10.1038/s41588-022-01237-2
Grover C. E. et al. Insights into the evolution of the New World diploid cottons (Gossypium, subgenus Houzingenia) based on genome sequencing //Genome Biology and Evolution. – 2019. – Vol. 11(1). – P. 53-71. https://doi.org/10.1093/gbe/evy256
Udall J. A. et al. De novo genome sequence assemblies of Gossypium raimondii and Gossypium turneri //G3: Genes, Genomes, Genetics. – 2019. – Vol. 9(10). – P. 3079-3085. https://doi.org/10.1534/g3.119.400392
Stewart J. M. D. Gossypium anapoides (Malvaceae), a new species from western Australia //Novon: A Journal for Botanical Nomenclature. – 2015. – Vol. 23(4). – P. 447-451. https://doi.org/10.3417/2007140
Gallagher J. P. et al. A new species of cotton from Wake Atoll, Gossypium stephensii (Malvaceae) //Systematic Botany. – 2017. – Vol. 42(1) – P. 115-123. https://doi.org/10.1600/036364417X694593
Grover C. E. et al. A high-resolution model of gene expression during Gossypium hirsutum (cotton) fiber development //bioRxiv. – 2024. – P. 2024.07. 20.604417. https://doi.org/10.1101/2024.07.20.604417
Flagel L. E., Wendel J. F., Udall J. A. Duplicate gene evolution, homoeologous recombination, and transcriptome characterization in allopolyploid cotton //BMC genomics. – 2012. – Vol. 13. – P. 1-13. https://doi.org/10.1186/1471-2164-13-302
Min W. et al. Root distribution and growth of cotton as affected by drip irrigation with saline water //Field Crops Research. – 2014. – Vol. 169. – P. 1-10. https://doi.org/10.1016/j.fcr.2014.09.002
Li F. et al. Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolution //Nature biotechnology. – 2015. – Vol. 33(5). – P. 524-530. https://doi.org/10.1038/nbt.3208
Wang K., Wendel J. F., Hua J. Designations for individual genomes and chromosomes in Gossypium //Journal of Cotton Research. – 2018. – Vol. 1(1). – P. 1-5. https://doi.org/10.1186/s42397-018-0002-1
Ning W. et al. Origin and diversity of the wild cottons (Gossypium hirsutum) of Mound Key, Florida //Scientific Reports. – 2024. – Vol. 14(1). – P. 14046. https://doi.org/10.1038/s41598-024-64887-8
Wang M. et al. Reference genome sequences of two cultivated allotetraploid cottons, Gossypium hirsutum and Gossypium barbadense //Nature genetics. – 2019. – Vol. 51(2). – P. 224-229. https://doi.org/10.1038/s41588-018-0282-x
Chen Z. J. et al. Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement //Nature genetics. – 2020. – Vol. 52(5). – P. 525-533. https://doi.org/10.1038/s41588-020-0614-5
De Lima L. F. et al. Ethnobotanical and antimicrobial activities of the Gossypium (Cotton) genus: A review //Journal of Ethnopharmacology. – 2021. – Vol. 279. – P. 114363. https://doi.org/10.1016/j.jep.2021.114363
Gallagher, J., Grover, C., Rex, K., Moran, M., Wendel, J. A new species of cotton from Wake Atoll, Gossypium stephensii (Malvaceae) // Systematic Botany. – 2017. – Vol. 42. — P. 115–123. https://doi.org/10.1600/036364417X694593
Peng, R., Xu, Y., Tian, S., Unver, T., Liu, Z., Zhou, Z., Cai, X., Wang, K., Wei, Y., Liu, Y., Wang, H., Hu, G., Zhang, Z., Grover, C.E., Hou, Y., Wang, Y., Li, P., Wang, T., Lu, Q., Wang, Y., Conover, J.L., Ghazal, H., Wang, Q., Zhang, B., Van Montagu, M., Van de Peer, Y., Wendel, J.F., Liu, F. Evolutionary divergence of duplicated genomes in newly described allotetraploid cottons // Proceedings of the National Academy of Sciences of the United States of America. – 2022. – Vol. 119(39). – e2208496119. https://doi.org/10.1186/s12870-024-05262-7
Hu G. et al. Evolution and diversity of the cotton genome //Cotton precision breeding. – Cham : Springer International Publishing, 2021. – P. 25-78. https://doi.org/10.1007/978-3-030-64504-5_18
Viot C. R., Wendel J. F. Evolution of the cotton genus, Gossypium, and its domestication in the Americas //Critical Reviews in Plant Sciences. – 2023. – Vol. 42(1). – P. 1-33. https://doi.org/10.1080/07352689.2022.2156061
Maryum Z. et al. An overview of salinity stress, mechanism of salinity tolerance and strategies for its management in cotton //Frontiers in Plant Science. – 2022. – Vol. 13. – P. 907937. https://doi.org/10.3389/fpls.2022.907937
Aslam S. et al. The tale of cotton plant: From wild type to domestication, leading to its improvement by genetic transformation //American Journal of Molecular Biology. – 2020. – Vol. 10(2). – P. 91-127. https://doi.org/10.4236/ajmb.2020.102008
Chen Z. J. et al. Toward sequencing cotton (Gossypium) genomes //Plant physiology. – 2007. – Vol. 145(4). – . 1303-1310. https://doi.org/10.1104/pp.107.107672
https://www.genome.gov/about-genomics/fact-sheets/Sequencing-Human-Genome-cost
Schatz M. C., Witkowski J., McCombie W. R. Current challenges in de novo plant genome sequencing and assembly //Genome biology. – 2012. – Vol. 13. – P. 1-7. https://doi.org/10.1186/gb-2012-13-4-243
Claros M. G. et al. Why assembling plant genome sequences is so challenging //Biology. – 2012. – Vol. 1(2). – P. 439-459. https://doi.org/10.3390/biology1020439
Wu Y. et al. Comparative chloroplast genomics of Gossypium species: insights into repeat sequence variations and phylogeny //Frontiers in Plant Science. – 2018. – Vol. 9. – P. 376. https://doi.org/10.3389/fpls.2018.00376
Stewart J, Craven L, Brubaker C, Wendel J. Gossypium anapoides (Malvaceae), a new species from Western Australia. Novon: a journal for botanical nomenclature. 2015. 23(4):447-451 https://doi.org/10.3417/2007140
Shim J., Mangat P. K., Angeles-Shim R. B. Natural variation in wild Gossypium species as a tool to broaden the genetic base of cultivated cotton //J. Plant Sci. Curr. Res. – 2018. – Vol. 2. – №. 005. https://doi.org/10.24966/PSCR-3743/100005
Govaerts R. et al. The World Checklist of Vascular Plants, a continuously updated resource for exploring global plant diversity //Scientific data. – 2021. – Vol. 8(1). – P. 215. https://doi.org/10.1038/s41597-021-00997-6
Wang K., Wendel J. F., Hua J. Designations for individual genomes and chromosomes in Gossypium //Journal of Cotton Research. – 2018. – Vol. 1(1). – P. 1-5. https://doi.org/10.1186/s42397-018-0002-1
Grover C. E. et al. The Gossypium anomalum genome as a resource for cotton improvement and evolutionary analysis of hybrid incompatibility //G3. – 2021. – Vol. 11(11). – P. 319. https://doi.org/10.1093/g3journal/jkab319
Chen Z. et al. Entire nucleotide sequences of Gossypium raimondii and G. arboreum mitochondrial genomes revealed A‐genome species as cytoplasmic donor of the allotetraploid species //Plant Biology. – 2017. – Vol. 19(3). – P. 484-493. https://doi.org/10.1111/plb.12536
Yu D. et al. Multi‐omics assisted identification of the key and species‐specific regulatory components of drought‐tolerant mechanisms in Gossypium stocksii //Plant Biotechnology Journal. – 2021. – Vol. 19(9). – P. 1690. https://doi.org/10.1111/pbi.13655
Shen C. et al. Gossypium tomentosum genome and interspecific ultra-dense genetic maps reveal genomic structures, recombination landscape and flowering depression in cotton //Genomics. – 2021. – Vol. 113.(4). – P. 1999-2009. https://doi.org/10.1016/j.ygeno.2021.04.036
Makhmadjanov S. P. et al. Cotton advanced lines assessment in the southern region of Kazakhstan. – 2023 http://doi.org/10.54910/sabrao2023.55.2.1.
Rakhimov A. A. Development of the basics of mutational selection of cotton for quantitative traits: dissertation. – Tashkent, 2018. – 185 p.
Saidov R. K. Improvement of industrial cotton varieties (Gossypium hirsutum L.) under the influence of ionizing radiation: dissertation. – Tashkent, 2020. – 210 p.
Mamatov K. S., Karimov T. I. New mutant cotton varieties // CyberLeninka Electronic Scientific Library. – 2021. – No. 4. – P. 45–52.
Rasulov U. B., Yuldashev K. M. Genetics, selection, and seed production of cotton. – Tashkent: UzAgroPress, 2019. – 312 p.
Kasimov A. T., Tursunov N. O. The gene pool of world cotton diversity – the basis of fundamental and applied research // ResearchGate. – 2018. – Vol. 6. – P. 12–20.